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WormBase Tree Display for Gene: WBGene00039143

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Name Class

WBGene00039143SMapS_parentSequencecb25.fpc4152
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classelt
RNASeq_FPKMWBls:000000213.0187From_analysisRNASeq.briggsae.WBls:0000002.control_mean
14.5029From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.7603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
9.79276From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
11.9543From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.1478From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.76117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003150.938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
156.077From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
161.216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
137.174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
149.776From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004101.153From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
104.01From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
106.868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
115.751From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
116.462From_analysisRNASeq.briggsae.WBls:0000004.control_mean
128.12From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
130.419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.3374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.98034From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
8.97424From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.60498From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
10.0945From_analysisRNASeq.briggsae.WBls:0000027.control_median
10.5841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.37671From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003526.3697From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.0122From_analysisRNASeq.briggsae.WBls:0000038.control_mean
10.7016From_analysisRNASeq.briggsae.WBls:0000038.control_median
11.7625From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
15.6026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.04304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.64069From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004114.9168From_analysisRNASeq.briggsae.WBls:0000041.control_mean
33.4005From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
7.66513From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
9.21613From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
9.30075From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.38538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
15.8246From_analysisRNASeq.briggsae.WBls:0000041.control_median
18.518From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.2638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
29.1768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000633.2794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
3.72543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.45164From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
4.6247From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.24228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
6.42477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
4.10315From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
4.27739From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.53778From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010111.7625From_analysisRNASeq.briggsae.total_over_all_stages.control_median
28.508From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
13.4201From_analysisRNASeq.briggsae.total_over_all_stages.control_median
37.1865From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00137358
00137359
00137360
00137361
00137362
Ortholog (27)
ParalogWBGene00029417Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032529Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034302Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034303Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036945Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans elt-1. In C. elegans, elt-1 is involved in several processes, including epidermal cell fate specification; regulation of transcription by RNA polymerase II; and spermatid development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDSCBG20056
Corresponding_CDS_historyCBG20056:bp194
Corresponding_transcriptCBG20056.1
Other_sequence (18)
Experimental_infoExpr_patternExpr1064019
Microarray_resultsGPL8303_CB6_WBGene00039143_A
GPL8303_CB6_WBGene00039143_B
GPL8303_CB6_WBGene00039143_C
GPL8303_CB6_WBGene00039143_D
GPL8303_CB6_WBGene00039143_E
GPL14143_CBG20056_391-450_0.855_17_C
GPL14143_CBG20056_900-959_0.865_13_B
GPL14143_CBG20056_989-1048_0.928_3_A
MethodGene