WormBase Tree Display for Gene: WBGene00162587

WBGene00162587 SMap: S_parent: Sequence: Cbre_Contig23
  Identity: Version: 2
    Name: CGC_name: Cbn-sde-2.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN23862
      Molecular_name: CBN23862
        CBN23862.1
        CN15847
      Public_name: Cbn-sde-2.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Cbn-sde-2.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sde
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 18.0324 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        36.0649 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 11.5735 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        14.8415 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        32.6248 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        34.6513 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        35.0304 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 12.8988 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        15.5378 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        18.1767 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (16)
      WBls:0000101 5.73851 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        8.62265 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (29)
    Paralog: WBGene00141508 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00158907 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00156411 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Replication stress response SDE2 C-terminal; Silencing defective 2 N-terminal ubiquitin domain; and Sde2, N-terminal ubiquitin domain. Is an ortholog of C. elegans sde-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS292 version of WormBase
          Date_last_updated: 24 Apr 2024 00:00:00
  Molecular_info: Corresponding_CDS: CBN23862
    Corresponding_transcript: CBN23862.1
    Other_sequence (17)
  Method: Gene