WormBase Tree Display for Variation: WBVar02001140
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WBVar02001140 | Name | Public_name | WBVar02001140 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00728602 | |||||||
F56B6.2a.1:c.1696+271del | ||||||||
F56B6.2j.1:c.1705+271del | ||||||||
F56B6.2e.1:c.211+271del | ||||||||
F56B6.2h.1:c.1711+271del | ||||||||
F56B6.2b.1:c.1585+271del | ||||||||
F56B6.2i.1:c.1702+271del | ||||||||
F56B6.2c.1:c.511+271del | ||||||||
HGVSg | CHROMOSOME_X:g.3550542del | |||||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | ||||
Flanking_sequences | GACAGTGCTATAGATTTTTCAAAAAGTGAC | AAAAAAACAGTAATTGCCACTTTCTGACTG | ||||||
Mapping_target | F56B6 | |||||||
Source_location | 225 | CHROMOSOME_X | 3550529 | 3550529 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004350 | ||||||
Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2j.1:c.1705+271del | |||||||
Intron_number | 9/14 | |||||||
F56B6.2e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2e.1:c.211+271del | |||||||
Intron_number | 1/7 | |||||||
F56B6.2i.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2i.1:c.1702+271del | |||||||
Intron_number | 10/16 | |||||||
F56B6.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2b.1:c.1585+271del | |||||||
Intron_number | 9/15 | |||||||
F56B6.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2a.1:c.1696+271del | |||||||
Intron_number | 10/16 | |||||||
F56B6.2h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2h.1:c.1711+271del | |||||||
Intron_number | 10/16 | |||||||
F56B6.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2c.1:c.511+271del | |||||||
Intron_number | 4/9 | |||||||
Method | WGS_Flibotte |