WormBase Tree Display for Variation: WBVar01883861
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WBVar01883861 | Name | Public_name | WBVar01883861 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00598605 | |||||||
C54D2.5c.1:c.4960-283G>T | ||||||||
C54D2.5a.1:c.4915-283G>T | ||||||||
C54D2.5g.1:c.4981-283G>T | ||||||||
C54D2.5a.3:c.4915-283G>T | ||||||||
C54D2.5a.2:c.4915-283G>T | ||||||||
C54D2.5d.1:c.5059-283G>T | ||||||||
C54D2.5e.1:c.4936-283G>T | ||||||||
HGVSg | CHROMOSOME_X:g.7850071C>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C54D2 | ||||
Flanking_sequences | GATGGCAAAATGCAGGTAGTTCTTGAGATT | TTTTCGAATTTTAGAACAAAAATTGAAATT | ||||||
Mapping_target | C54D2 | |||||||
Source_location | 225 | CHROMOSOME_X | 7850021 | 7850021 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000367 | ||||||
Transcript | C54D2.5a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5a.1:c.4915-283G>T | |||||||
Intron_number | 27/31 | |||||||
C54D2.5g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5g.1:c.4981-283G>T | |||||||
Intron_number | 25/28 | |||||||
C54D2.5a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5a.2:c.4915-283G>T | |||||||
Intron_number | 28/32 | |||||||
C54D2.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5c.1:c.4960-283G>T | |||||||
Intron_number | 26/30 | |||||||
C54D2.5a.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5a.3:c.4915-283G>T | |||||||
Intron_number | 26/30 | |||||||
C54D2.5d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5d.1:c.5059-283G>T | |||||||
Intron_number | 27/31 | |||||||
C54D2.5e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5e.1:c.4936-283G>T | |||||||
Intron_number | 26/30 | |||||||
Method | WGS_Flibotte |