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WormBase Tree Display for Variation: WBVar01883861

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Name Class

WBVar01883861NamePublic_nameWBVar01883861
Other_namecewivar00598605
C54D2.5c.1:c.4960-283G>T
C54D2.5a.1:c.4915-283G>T
C54D2.5g.1:c.4981-283G>T
C54D2.5a.3:c.4915-283G>T
C54D2.5a.2:c.4915-283G>T
C54D2.5d.1:c.5059-283G>T
C54D2.5e.1:c.4936-283G>T
HGVSgCHROMOSOME_X:g.7850071C>A
Sequence_detailsSMapS_parentSequenceC54D2
Flanking_sequencesGATGGCAAAATGCAGGTAGTTCTTGAGATTTTTTCGAATTTTAGAACAAAAATTGAAATT
Mapping_targetC54D2
Source_location225CHROMOSOME_X78500217850021From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.4915-283G>T
Intron_number27/31
C54D2.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5g.1:c.4981-283G>T
Intron_number25/28
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.4915-283G>T
Intron_number28/32
C54D2.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5c.1:c.4960-283G>T
Intron_number26/30
C54D2.5a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.3:c.4915-283G>T
Intron_number26/30
C54D2.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5d.1:c.5059-283G>T
Intron_number27/31
C54D2.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5e.1:c.4936-283G>T
Intron_number26/30
MethodWGS_Flibotte