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WormBase Tree Display for Variation: WBVar01858899

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Name Class

WBVar01858899NamePublic_nameWBVar01858899
Other_name (15)
HGVSgCHROMOSOME_IV:g.11995080G>T
Sequence_detailsSMapS_parentSequenceZK617
Flanking_sequencesCCAGCGACTTTTGCTTTGAGTTCTTCTGATTCGACTTCTCTTCGACTTCTTTGTGGTGCT
Mapping_targetZK617
Source_location225CHROMOSOME_IV1199505711995057From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006759
TranscriptZK617.1i.1 (11)
ZK617.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK617.1a.1:c.1884+174C>A
Intron_number14/32
ZK617.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK617.1g.1:c.1884+174C>A
Intron_number13/31
ZK617.1f.1 (11)
ZK617.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK617.1d.1:c.723+174C>A
Intron_number4/21
ZK617.1c.1 (11)
ZK617.1h.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScZK617.1h.1:c.2456C>A
HGVSpCE49973:p.Thr819Lys
cDNA_position2456
CDS_position2456
Protein_position819
Exon_number15/34
Codon_changeaCa/aAa
Amino_acid_changeT/K
ZK617.1b.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScZK617.1b.1:c.2531C>A
HGVSpCE33018:p.Thr844Lys
cDNA_position2531
CDS_position2531
Protein_position844
Exon_number16/34
Codon_changeaCa/aAa
Amino_acid_changeT/K
ZK617.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZK617.1e.1:c.672+174C>A
Intron_number3/20
MethodWGS_Flibotte