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WormBase Tree Display for Variation: WBVar01849319

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Name Class

WBVar01849319NamePublic_nameWBVar01849319
Other_namecewivar00562265
C54D2.5d.1:c.5437-255C>T
C54D2.5a.2:c.5293-255C>T
C54D2.5a.3:c.5293-255C>T
C54D2.5e.1:c.5314-255C>T
C54D2.5c.1:c.5338-255C>T
C54D2.5g.1:c.5359-255C>T
C54D2.5a.1:c.5293-255C>T
HGVSgCHROMOSOME_X:g.7848755G>A
Sequence_detailsSMapS_parentSequenceC54D2
Flanking_sequencesCCCTTTTAAAATTGTTATTTACAGTGCTCGCATTGCTATGCTCAACTCAATTTTGTCAAT
Mapping_targetC54D2
Source_location225CHROMOSOME_X78487057848705From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023018From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.5293-255C>T
Intron_number29/31
C54D2.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5g.1:c.5359-255C>T
Intron_number27/28
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.5293-255C>T
Intron_number30/32
C54D2.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5c.1:c.5338-255C>T
Intron_number28/30
C54D2.5a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.3:c.5293-255C>T
Intron_number28/30
C54D2.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5d.1:c.5437-255C>T
Intron_number29/31
C54D2.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5e.1:c.5314-255C>T
Intron_number28/30
MethodWGS_Flibotte