WormBase Tree Display for Variation: WBVar01822319
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WBVar01822319 | Name | Public_name | WBVar01822319 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00534080 | |||||||
Y41G9A.4d.1:c.2147-161T>C | ||||||||
Y41G9A.4e.1:c.206-161T>C | ||||||||
Y41G9A.4c.1:c.2114-161T>C | ||||||||
Y41G9A.4b.1:c.2246-161T>C | ||||||||
HGVSg | CHROMOSOME_X:g.2966947T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y41G9A | ||||
Flanking_sequences | AGGATTATTGATTTTTTGTGTTTCAAAATG | AGAAACAGTAATTTTATTACCTCACATAAT | ||||||
Mapping_target | Y41G9A | |||||||
Source_location | 225 | CHROMOSOME_X | 2966937 | 2966937 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021528 | ||||||
Transcript | Y41G9A.4c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41G9A.4c.1:c.2114-161T>C | |||||||
Intron_number | 16/20 | |||||||
Y41G9A.4d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41G9A.4d.1:c.2147-161T>C | |||||||
Intron_number | 16/19 | |||||||
Y41G9A.4b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41G9A.4b.1:c.2246-161T>C | |||||||
Intron_number | 17/21 | |||||||
Y41G9A.4e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y41G9A.4e.1:c.206-161T>C | |||||||
Intron_number | 1/4 | |||||||
Method | WGS_Flibotte |