WormBase Tree Display for Variation: WBVar01816090
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WBVar01816090 | Name | Public_name | WBVar01816090 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00527489 | |||||||
C54D2.5a.2:c.-77+82A>T | ||||||||
C54D2.5a.1:c.-77+174A>T | ||||||||
HGVSg | CHROMOSOME_X:g.7875729T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C39D10 | ||||
Flanking_sequences | TTTTTGGAAAACTTTACGCAAAATAGACTA | TAATATTTTTAATTTTTCAAGAAAACTTGA | ||||||
Mapping_target | C39D10 | |||||||
Source_location | 225 | CHROMOSOME_X | 7875681 | 7875681 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000367 | ||||||
Transcript | C54D2.5a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5a.1:c.-77+174A>T | |||||||
Intron_number | 1/31 | |||||||
C54D2.5a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5a.2:c.-77+82A>T | |||||||
Intron_number | 2/32 | |||||||
Method | WGS_Flibotte |