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WormBase Tree Display for Variation: WBVar01816090

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Name Class

WBVar01816090NamePublic_nameWBVar01816090
Other_namecewivar00527489
C54D2.5a.2:c.-77+82A>T
C54D2.5a.1:c.-77+174A>T
HGVSgCHROMOSOME_X:g.7875729T>A
Sequence_detailsSMapS_parentSequenceC39D10
Flanking_sequencesTTTTTGGAAAACTTTACGCAAAATAGACTATAATATTTTTAATTTTTCAAGAAAACTTGA
Mapping_targetC39D10
Source_location225CHROMOSOME_X78756817875681From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022902From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.-77+174A>T
Intron_number1/31
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.-77+82A>T
Intron_number2/32
MethodWGS_Flibotte