WormBase Tree Display for Variation: WBVar01794180
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WBVar01794180 | Name | Public_name | WBVar01794180 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00496536 | |||||||
Y43F4B.5b.1:c.160+4A>T | ||||||||
Y43F4B.5a.1:c.160+4A>T | ||||||||
HGVSg | CHROMOSOME_III:g.13299542A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y43F4B | ||||
Flanking_sequences | ATACTCGATTGGTTTTTGGAACTGCTGGTG | GAAGAAAATAATATTACACAGCTGCAGTGT | ||||||
Mapping_target | Y43F4B | |||||||
Source_location | 225 | CHROMOSOME_III | 13299441 | 13299441 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012803 | ||||||
Transcript | Y43F4B.5a.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y43F4B.5a.1:c.160+4A>T | |||||||
Intron_number | 2/7 | |||||||
Y43F4B.5b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y43F4B.5b.1:c.160+4A>T | |||||||
Intron_number | 1/5 | |||||||
Method | WGS_Flibotte |