WormBase Tree Display for Variation: WBVar01727827
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WBVar01727827 | Name | Public_name | WBVar01727827 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00426299 | |||||||
C11D2.6n.1:c.34-1152C>T | ||||||||
C11D2.6o.1:c.34-1152C>T | ||||||||
C11D2.6p.1:c.34-1152C>T | ||||||||
C11D2.6m.1:c.34-1152C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.6180404G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C11D2 | ||||
Flanking_sequences | ATTAAAACTACATTGTTATAAAACGTTAAT | AAACAGTACTTGAAAAAATATATTATTATT | ||||||
Mapping_target | C11D2 | |||||||
Source_location | 225 | CHROMOSOME_IV | 6180393 | 6180393 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006809 | ||||||
Transcript | C11D2.6o.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C11D2.6o.1:c.34-1152C>T | |||||||
Intron_number | 1/28 | |||||||
C11D2.6p.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C11D2.6p.1:c.34-1152C>T | |||||||
Intron_number | 1/28 | |||||||
C11D2.6n.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C11D2.6n.1:c.34-1152C>T | |||||||
Intron_number | 1/27 | |||||||
C11D2.6m.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C11D2.6m.1:c.34-1152C>T | |||||||
Intron_number | 1/29 | |||||||
Method | WGS_Flibotte |