WormBase Tree Display for Variation: WBVar01607002
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WBVar01607002 | Name | Public_name | WBVar01607002 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00285502 | |||||||
T08A11.1a.1:c.4181-149T>A | ||||||||
T08A11.1d.1:c.4193-149T>A | ||||||||
T08A11.1f.1:c.4187-143T>A | ||||||||
T08A11.1g.1:c.4187-143T>A | ||||||||
T08A11.1b.1:c.4187-149T>A | ||||||||
T08A11.1c.1:c.4187-149T>A | ||||||||
T08A11.1e.1:c.4181-143T>A | ||||||||
T08A11.1h.1:c.4193-143T>A | ||||||||
HGVSg | CHROMOSOME_III:g.4251153A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | T08A11 | ||||
Flanking_sequences | TCAAAAATTCCAACCCCATTGTGCAAAAAA | TCGGGATTTGCTGTTAAAAAATTTATTTAC | ||||||
Mapping_target | T08A11 | |||||||
Source_location | 225 | CHROMOSOME_III | 4251126 | 4251126 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00011604 | ||||||
Transcript | T08A11.1e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T08A11.1e.1:c.4181-143T>A | |||||||
Intron_number | 14/17 | |||||||
T08A11.1g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T08A11.1g.1:c.4187-143T>A | |||||||
Intron_number | 15/18 | |||||||
T08A11.1h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T08A11.1h.1:c.4193-143T>A | |||||||
Intron_number | 15/18 | |||||||
T08A11.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T08A11.1d.1:c.4193-149T>A | |||||||
Intron_number | 15/18 | |||||||
T08A11.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T08A11.1f.1:c.4187-143T>A | |||||||
Intron_number | 14/17 | |||||||
T08A11.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T08A11.1c.1:c.4187-149T>A | |||||||
Intron_number | 14/17 | |||||||
T08A11.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T08A11.1b.1:c.4187-149T>A | |||||||
Intron_number | 15/18 | |||||||
T08A11.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T08A11.1a.1:c.4181-149T>A | |||||||
Intron_number | 15/18 | |||||||
Method | WGS_Flibotte |