WormBase Tree Display for Variation: WBVar01472573
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| WBVar01472573 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01472573 | ||||
| Other_name | cewivar00159678 | |||||
| CE31446:p.Asn31= | ||||||
| C44H4.7a.1:c.93C>T | ||||||
| CE50508:p.Asn31= | ||||||
| C44H4.7b.1:c.93C>T | ||||||
| CE31445:p.Asn31= | ||||||
| C44H4.7c.1:c.93C>T | ||||||
| HGVSg | CHROMOSOME_X:g.14603271C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | C44H4 | ||
| Flanking_sequences | TTATTCAGGAATTCCTCATGGAAATACCAA | GCAATTATGTCAACAATTCAGTCGTTGCAA | ||||
| Mapping_target | C44H4 | |||||
| Type_of_mutation | Substitution | c | t | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Andersen | ||||||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | WGS_Andersen | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_rs | rs | 193357875 | ||
| dbSNP_ss | ss | 295533794 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00001325 | ||||
| Transcript | C44H4.7c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | |||||
| HGVSc | C44H4.7c.1:c.93C>T | |||||
| HGVSp | CE50508:p.Asn31= | |||||
| cDNA_position | 132 | |||||
| CDS_position | 93 | |||||
| Protein_position | 31 | |||||
| Exon_number | 3/18 | |||||
| Codon_change | aaC/aaT | |||||
| Amino_acid_change | N | |||||
| C44H4.7b.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | C44H4.7b.1:c.93C>T | |||||
| HGVSp | CE31446:p.Asn31= | |||||
| cDNA_position | 168 | |||||
| CDS_position | 93 | |||||
| Protein_position | 31 | |||||
| Exon_number | 3/18 | |||||
| Codon_change | aaC/aaT | |||||
| Amino_acid_change | N | |||||
| C44H4.7a.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | C44H4.7a.1:c.93C>T | |||||
| HGVSp | CE31445:p.Asn31= | |||||
| cDNA_position | 120 | |||||
| CDS_position | 93 | |||||
| Protein_position | 31 | |||||
| Exon_number | 3/19 | |||||
| Codon_change | aaC/aaT | |||||
| Amino_acid_change | N | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
