WormBase Tree Display for Variation: WBVar01452499
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WBVar01452499 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01452499 | ||||
Other_name | cewivar00155558 | |||||
T12E12.3.1:c.1650C>T | ||||||
CE13587:p.Thr550= | ||||||
HGVSg | CHROMOSOME_IV:g.5543448C>T | |||||
Sequence_details | SMap | S_parent | Sequence | T12E12 | ||
Flanking_sequences | TTCTATCACCGAGAGTACAAATGACTTTAC | GTTTTCGAAGGTACAGCTGCCGCTGTGCTC | ||||
Mapping_target | T12E12 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_rs | rs | 193338156 | ||
dbSNP_ss | ss | 295514075 | ||||
Status | Live | |||||
Affects | Gene | WBGene00020464 | ||||
Transcript | T12E12.3.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | T12E12.3.1:c.1650C>T | |||||
HGVSp | CE13587:p.Thr550= | |||||
cDNA_position | 1660 | |||||
CDS_position | 1650 | |||||
Protein_position | 550 | |||||
Exon_number | 5/8 | |||||
Codon_change | acC/acT | |||||
Amino_acid_change | T | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |