WormBase Tree Display for Variation: WBVar01450010
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WBVar01450010 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01450010 | ||||
Other_name | CE48915:p.Arg200= | |||||
B0545.3.1:c.600G>A | ||||||
HGVSg | CHROMOSOME_IV:g.88068C>T | |||||
Sequence_details | SMap | S_parent | Sequence | B0545 | ||
Flanking_sequences | GGCCCCCGAAACGTCCAATCCATCGGTGGT | CGGAAATAGAAGGCATTTTCGCCGCGAACC | ||||
Mapping_target | B0545 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00005309 | From_analysis | WGS_Andersen | |||
WBStrain00023152 | From_analysis | WGS_Andersen | ||||
WBStrain00023164 | From_analysis | WGS_Andersen | ||||
WBStrain00023176 | From_analysis | WGS_Andersen | ||||
WBStrain00023177 | From_analysis | WGS_Andersen | ||||
WBStrain00031279 | From_analysis | WGS_Andersen | ||||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193335667 | ||
dbSNP_ss | ss | 295511586 | ||||
Status | Live | |||||
Affects | Gene | WBGene00015246 | ||||
Transcript | B0545.3.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | B0545.3.1:c.600G>A | |||||
HGVSp | CE48915:p.Arg200= | |||||
cDNA_position | 674 | |||||
CDS_position | 600 | |||||
Protein_position | 200 | |||||
Exon_number | 6/10 | |||||
Codon_change | cgG/cgA | |||||
Amino_acid_change | R | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |