WormBase Tree Display for Variation: WBVar01445249
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WBVar01445249 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01445249 | ||||
Other_name | T08A11.1d.1:c.1335+32T>A | |||||
T08A11.1h.1:c.1335+32T>A | ||||||
T08A11.1b.1:c.1335+32T>A | ||||||
T08A11.1f.1:c.1335+32T>A | ||||||
T08A11.1c.1:c.1335+32T>A | ||||||
T08A11.1e.1:c.1335+32T>A | ||||||
T08A11.1g.1:c.1335+32T>A | ||||||
T08A11.1a.1:c.1335+32T>A | ||||||
HGVSg | CHROMOSOME_III:g.4259540A>T | |||||
Sequence_details | SMap | S_parent | Sequence | T08A11 | ||
Flanking_sequences | TTGCAAAACAATTTTTTTTCGTTTTTTTTT | AATTTTCAAAAAAAAAGTCCAATCGTCTCA | ||||
Mapping_target | T08A11 | |||||
Type_of_mutation | Substitution | a | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193332388 | ||
dbSNP_ss | ss | 295508307 | ||||
Status | Live | |||||
Affects | Gene | WBGene00011604 | ||||
Transcript | T08A11.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | T08A11.1e.1:c.1335+32T>A | |||||
Intron_number | 6/17 | |||||
T08A11.1g.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T08A11.1g.1:c.1335+32T>A | |||||
Intron_number | 7/18 | |||||
T08A11.1h.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T08A11.1h.1:c.1335+32T>A | |||||
Intron_number | 7/18 | |||||
T08A11.1d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T08A11.1d.1:c.1335+32T>A | |||||
Intron_number | 7/18 | |||||
T08A11.1f.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T08A11.1f.1:c.1335+32T>A | |||||
Intron_number | 6/17 | |||||
T08A11.1c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T08A11.1c.1:c.1335+32T>A | |||||
Intron_number | 6/17 | |||||
T08A11.1b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T08A11.1b.1:c.1335+32T>A | |||||
Intron_number | 7/18 | |||||
T08A11.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T08A11.1a.1:c.1335+32T>A | |||||
Intron_number | 7/18 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |