WormBase Tree Display for Variation: WBVar01262898
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WBVar01262898 | Evidence | Paper_evidence | WBPaper00037807 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | WBVar01262898 | |||||
Other_name | cewivar00386975 | ||||||
T08A11.1f.1:c.1336-181A>G | |||||||
T08A11.1h.1:c.1336-181A>G | |||||||
T08A11.1g.1:c.1336-181A>G | |||||||
T08A11.1e.1:c.1336-181A>G | |||||||
T08A11.1a.1:c.1336-181A>G | |||||||
T08A11.1b.1:c.1336-181A>G | |||||||
T08A11.1d.1:c.1336-181A>G | |||||||
T08A11.1c.1:c.1336-181A>G | |||||||
HGVSg | CHROMOSOME_III:g.4259245T>C | ||||||
Sequence_details | SMap | S_parent | Sequence | T08A11 | |||
Flanking_sequences | TTTGTGGTGGCCGAGCTTTTCTATTCCATGACAGAAAACTATTCCATGAC | GTCCCAGTCTCTAATTCAATATACAAAATTAGATATTTTCACAAATCGAA | |||||
Mapping_target | T08A11 | ||||||
Type_of_mutation | Substitution | t | C | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | ||||||
Variation_type | SNP | ||||||
Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | AX | ||||||
Analysis | WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | |||||||
DB_info | Database | dbSNP_ss | ss | 539098552 | |||
Status | Live | ||||||
Affects | Gene | WBGene00011604 | |||||
Transcript | T08A11.1e.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | ||||||
HGVSc | T08A11.1e.1:c.1336-181A>G | ||||||
Intron_number | 6/17 | ||||||
T08A11.1g.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T08A11.1g.1:c.1336-181A>G | ||||||
Intron_number | 7/18 | ||||||
T08A11.1h.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T08A11.1h.1:c.1336-181A>G | ||||||
Intron_number | 7/18 | ||||||
T08A11.1d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T08A11.1d.1:c.1336-181A>G | ||||||
Intron_number | 7/18 | ||||||
T08A11.1f.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T08A11.1f.1:c.1336-181A>G | ||||||
Intron_number | 6/17 | ||||||
T08A11.1c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T08A11.1c.1:c.1336-181A>G | ||||||
Intron_number | 6/17 | ||||||
T08A11.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T08A11.1b.1:c.1336-181A>G | ||||||
Intron_number | 7/18 | ||||||
T08A11.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | ||||||
HGVSc | T08A11.1a.1:c.1336-181A>G | ||||||
Intron_number | 7/18 | ||||||
Reference | WBPaper00037807 | ||||||
Method | WGS_De_Bono |