WormBase Tree Display for Variation: WBVar01262880

WBVar01262880 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01262880
    Other_name: cewivar00386957
      T08A11.1f.1:c.5001-79T>A
      T08A11.1g.1:c.5001-79T>A
      T08A11.1a.1:c.4989-79T>A
      T08A11.1d.1:c.5001-79T>A
      T08A11.1c.1:c.4995-79T>A
      T08A11.1h.1:c.5007-79T>A
      T08A11.1b.1:c.4995-79T>A
      T08A11.1e.1:c.4995-79T>A
    HGVSg: CHROMOSOME_III:g.4248899A>T
  Sequence_details: SMap: S_parent: Sequence: Y44F5A
    Flanking_sequences: TTTTTAAAAATAGTTTTTATAATTTGCGAAATTCGACTAATCGTAAAAAT GGAAATTTTCATTTTATTGGTAACTTATCCATTTTCTGTAGAATTTTTGT
    Mapping_target: Y44F5A
    Type_of_mutation: Substitution: a T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539098536
    Status: Live
  Affects: Gene: WBGene00011604
    Transcript: T08A11.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T08A11.1e.1:c.4995-79T>A
        Intron_number: 16/17
      T08A11.1g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T08A11.1g.1:c.5001-79T>A
        Intron_number: 17/18
      T08A11.1h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T08A11.1h.1:c.5007-79T>A
        Intron_number: 17/18
      T08A11.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T08A11.1d.1:c.5001-79T>A
        Intron_number: 17/18
      T08A11.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T08A11.1f.1:c.5001-79T>A
        Intron_number: 16/17
      T08A11.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T08A11.1c.1:c.4995-79T>A
        Intron_number: 16/17
      T08A11.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T08A11.1b.1:c.4995-79T>A
        Intron_number: 17/18
      T08A11.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T08A11.1a.1:c.4989-79T>A
        Intron_number: 17/18
  Reference: WBPaper00037807
  Method: WGS_De_Bono