WormBase Tree Display for Variation: WBVar01175087
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| WBVar01175087 | Name | Public_name | gk466882 | ||
|---|---|---|---|---|---|
| Other_name | F49E2.2a.2:c.1377C>T | ||||
| F49E2.2c.1:c.1539C>T | |||||
| F49E2.2a.1:c.1377C>T | |||||
| F49E2.2a.3:c.1377C>T | |||||
| CE31527:p.Phe459= | |||||
| CE23752:p.Phe513= | |||||
| F49E2.2a.4:c.1377C>T | |||||
| HGVSg | CHROMOSOME_X:g.9572745C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F49E2 | |
| Flanking_sequences | GCACAACAACACAGTCGCAATCATAGTACAGATATTTCGGTTCCATCATT | TTCAACCCATCACAATATGGAAGTATTCTGATTGTTAACGATGATTTCAA | |||
| Mapping_target | F49E2 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00039094 | ||||
| Laboratory | VC | ||||
| Analysis | Million_Mutation_Project | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00009886 | |||
| Transcript | F49E2.2c.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F49E2.2c.1:c.1539C>T | ||||
| HGVSp | CE23752:p.Phe513= | ||||
| cDNA_position | 1539 | ||||
| CDS_position | 1539 | ||||
| Protein_position | 513 | ||||
| Exon_number | 11/12 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| F49E2.2a.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F49E2.2a.2:c.1377C>T | ||||
| HGVSp | CE31527:p.Phe459= | ||||
| cDNA_position | 1524 | ||||
| CDS_position | 1377 | ||||
| Protein_position | 459 | ||||
| Exon_number | 13/15 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| F49E2.2a.4 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F49E2.2a.4:c.1377C>T | ||||
| HGVSp | CE31527:p.Phe459= | ||||
| cDNA_position | 1583 | ||||
| CDS_position | 1377 | ||||
| Protein_position | 459 | ||||
| Exon_number | 12/14 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| F49E2.2a.3 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F49E2.2a.3:c.1377C>T | ||||
| HGVSp | CE31527:p.Phe459= | ||||
| cDNA_position | 1479 | ||||
| CDS_position | 1377 | ||||
| Protein_position | 459 | ||||
| Exon_number | 12/14 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| F49E2.2a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F49E2.2a.1:c.1377C>T | ||||
| HGVSp | CE31527:p.Phe459= | ||||
| cDNA_position | 1406 | ||||
| CDS_position | 1377 | ||||
| Protein_position | 459 | ||||
| Exon_number | 11/13 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| Reference | WBPaper00042537 | ||||
| Method | Million_mutation |
