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WormBase Tree Display for Variation: WBVar01134602

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Name Class

WBVar01134602NamePublic_namegk435574
Other_nameF56B6.2j.1:c.1706-996C>T
F56B6.2h.1:c.1712-996C>T
F56B6.2a.1:c.1697-996C>T
F56B6.2c.1:c.512-996C>T
F56B6.2b.1:c.1586-996C>T
F56B6.2i.1:c.1703-996C>T
F56B6.2e.1:c.212-996C>T
HGVSgCHROMOSOME_X:g.3551551C>T
Sequence_detailsSMapS_parentSequenceF56B6
Flanking_sequencesCCCACGCCTGTTTTTGGAACAACACATCACTGCCACGCATTTTGTATCGACGATAGAAATGAGGGGATGCACAGTTTTTATTGAGGACAACTTTCTTTAG
Mapping_targetF56B6
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeAllele
Origin (5)
AffectsGeneWBGene00004350
TranscriptF56B6.2j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2j.1:c.1706-996C>T
Intron_number9/14
F56B6.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2e.1:c.212-996C>T
Intron_number1/7
F56B6.2i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2i.1:c.1703-996C>T
Intron_number10/16
F56B6.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2b.1:c.1586-996C>T
Intron_number9/15
F56B6.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2a.1:c.1697-996C>T
Intron_number10/16
F56B6.2h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2h.1:c.1712-996C>T
Intron_number10/16
F56B6.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2c.1:c.512-996C>T
Intron_number4/9
ReferenceWBPaper00042537
MethodMillion_mutation