WormBase Tree Display for Variation: WBVar00946174
expand all nodes | collapse all nodes | view schema
WBVar00946174 | Name | Public_name | gk769182 | ||
---|---|---|---|---|---|
Other_name (18) | |||||
HGVSg | CHROMOSOME_IV:g.11987812G>A | ||||
Sequence_details | SMap | S_parent | Sequence | ZK617 | |
Flanking_sequences | ACCTTGACAGTTGTATCAGAAAGATCTTCACGATGAATTCTTGGAGCAAG | TTTCTTGGCTTCGCAACAACACGATCAGAAGGATCAGAAGGATCTCCAGT | |||
Mapping_target | ZK617 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00039672 | ||||
Laboratory | VC | ||||
Analysis | Million_Mutation_Project | ||||
Status | Live | ||||
Affects | Gene | WBGene00006759 | |||
Transcript | ZK617.1i.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | ZK617.1i.1:c.7953C>T | ||||
HGVSp | CE49956:p.Asn2651= | ||||
cDNA_position | 7953 | ||||
CDS_position | 7953 | ||||
Protein_position | 2651 | ||||
Exon_number | 24/33 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
ZK617.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1a.1:c.7071C>T | ||||
HGVSp | CE33017:p.Asn2357= | ||||
cDNA_position | 7198 | ||||
CDS_position | 7071 | ||||
Protein_position | 2357 | ||||
Exon_number | 23/33 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
ZK617.1g.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1g.1:c.7098C>T | ||||
HGVSp | CE46868:p.Asn2366= | ||||
cDNA_position | 7098 | ||||
CDS_position | 7098 | ||||
Protein_position | 2366 | ||||
Exon_number | 23/32 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
ZK617.1f.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1f.1:c.7335C>T | ||||
HGVSp | CE46948:p.Asn2445= | ||||
cDNA_position | 7335 | ||||
CDS_position | 7335 | ||||
Protein_position | 2445 | ||||
Exon_number | 22/31 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
ZK617.1d.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1d.1:c.5910C>T | ||||
HGVSp | CE49926:p.Asn1970= | ||||
cDNA_position | 5910 | ||||
CDS_position | 5910 | ||||
Protein_position | 1970 | ||||
Exon_number | 13/22 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
ZK617.1c.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1c.1:c.6411C>T | ||||
HGVSp | CE47057:p.Asn2137= | ||||
cDNA_position | 6672 | ||||
CDS_position | 6411 | ||||
Protein_position | 2137 | ||||
Exon_number | 17/26 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
ZK617.1h.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1h.1:c.7980C>T | ||||
HGVSp | CE49973:p.Asn2660= | ||||
cDNA_position | 7980 | ||||
CDS_position | 7980 | ||||
Protein_position | 2660 | ||||
Exon_number | 25/34 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
ZK617.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1b.1:c.8028C>T | ||||
HGVSp | CE33018:p.Asn2676= | ||||
cDNA_position | 8028 | ||||
CDS_position | 8028 | ||||
Protein_position | 2676 | ||||
Exon_number | 25/34 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
ZK617.1e.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1e.1:c.5859C>T | ||||
HGVSp | CE44668:p.Asn1953= | ||||
cDNA_position | 5859 | ||||
CDS_position | 5859 | ||||
Protein_position | 1953 | ||||
Exon_number | 12/21 | ||||
Codon_change | aaC/aaT | ||||
Amino_acid_change | N | ||||
Reference | WBPaper00042537 | ||||
Method | Million_mutation |