WormBase Tree Display for Variation: WBVar00946096
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WBVar00946096 | Name | Public_name | gk382373 | ||
---|---|---|---|---|---|
Other_name (18) | |||||
HGVSg | CHROMOSOME_IV:g.11976639C>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZK617 | |
Flanking_sequences | TCGTAAATCATGACCATTTCATTGTCATCCTCGAAAGCATCATGAAGGTT | ACAAGCGTCGGGTGTCTCAAAACTGACATGGTTTGAATCTCTTTTCTGAC | |||
Mapping_target | ZK617 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00038650 | ||||
Laboratory | VC | ||||
Analysis | Million_Mutation_Project | ||||
Status | Live | ||||
Affects | Gene | WBGene00006759 | |||
Transcript | ZK617.1i.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | ZK617.1i.1:c.18882G>A | ||||
HGVSp | CE49956:p.Val6294= | ||||
cDNA_position | 18882 | ||||
CDS_position | 18882 | ||||
Protein_position | 6294 | ||||
Exon_number | 29/33 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK617.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1a.1:c.18000G>A | ||||
HGVSp | CE33017:p.Val6000= | ||||
cDNA_position | 18127 | ||||
CDS_position | 18000 | ||||
Protein_position | 6000 | ||||
Exon_number | 28/33 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK617.1g.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1g.1:c.18027G>A | ||||
HGVSp | CE46868:p.Val6009= | ||||
cDNA_position | 18027 | ||||
CDS_position | 18027 | ||||
Protein_position | 6009 | ||||
Exon_number | 28/32 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK617.1f.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1f.1:c.18264G>A | ||||
HGVSp | CE46948:p.Val6088= | ||||
cDNA_position | 18264 | ||||
CDS_position | 18264 | ||||
Protein_position | 6088 | ||||
Exon_number | 27/31 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK617.1d.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1d.1:c.16839G>A | ||||
HGVSp | CE49926:p.Val5613= | ||||
cDNA_position | 16839 | ||||
CDS_position | 16839 | ||||
Protein_position | 5613 | ||||
Exon_number | 18/22 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK617.1c.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1c.1:c.17340G>A | ||||
HGVSp | CE47057:p.Val5780= | ||||
cDNA_position | 17601 | ||||
CDS_position | 17340 | ||||
Protein_position | 5780 | ||||
Exon_number | 22/26 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK617.1h.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1h.1:c.18909G>A | ||||
HGVSp | CE49973:p.Val6303= | ||||
cDNA_position | 18909 | ||||
CDS_position | 18909 | ||||
Protein_position | 6303 | ||||
Exon_number | 30/34 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK617.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1b.1:c.18957G>A | ||||
HGVSp | CE33018:p.Val6319= | ||||
cDNA_position | 18957 | ||||
CDS_position | 18957 | ||||
Protein_position | 6319 | ||||
Exon_number | 30/34 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
ZK617.1e.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | ZK617.1e.1:c.16788G>A | ||||
HGVSp | CE44668:p.Val5596= | ||||
cDNA_position | 16788 | ||||
CDS_position | 16788 | ||||
Protein_position | 5596 | ||||
Exon_number | 17/21 | ||||
Codon_change | gtG/gtA | ||||
Amino_acid_change | V | ||||
Reference | WBPaper00042537 | ||||
Method | Million_mutation |