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WormBase Tree Display for Variation: WBVar00395671

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Name Class

WBVar00395671NamePublic_namegk172428
Other_name (16)
HGVSgCHROMOSOME_III:g.4250915C>T
Sequence_detailsSMapS_parentSequenceT08A11
Flanking_sequencesTTCAACCATCATGAATCTCGATACTTTCGAATTTTCGGGAAAGTCAGGATCGAGATATAACACAGTTGGAATCCATATTCAGCTTTGAATTTGAACATTT
Mapping_targetT08A11
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00038151
LaboratoryVC
AnalysisMillion_Mutation_Project
StatusLive
AffectsGeneWBGene00011604
TranscriptT08A11.1e.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScT08A11.1e.1:c.4276G>A
HGVSpCE54607:p.Asp1426Asn
cDNA_position4276
CDS_position4276
Protein_position1426
Exon_number15/18
Codon_changeGat/Aat
Amino_acid_changeD/N
T08A11.1g.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScT08A11.1g.1:c.4282G>A
HGVSpCE54616:p.Asp1428Asn
cDNA_position4378
CDS_position4282
Protein_position1428
Exon_number16/19
Codon_changeGat/Aat
Amino_acid_changeD/N
T08A11.1h.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScT08A11.1h.1:c.4288G>A
HGVSpCE54610:p.Asp1430Asn
cDNA_position4384
CDS_position4288
Protein_position1430
Exon_number16/19
Codon_changeGat/Aat
Amino_acid_changeD/N
T08A11.1d.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScT08A11.1d.1:c.4282G>A
HGVSpCE54612:p.Asp1428Asn
cDNA_position4378
CDS_position4282
Protein_position1428
Exon_number16/19
Codon_changeGat/Aat
Amino_acid_changeD/N
T08A11.1f.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScT08A11.1f.1:c.4282G>A
HGVSpCE54622:p.Asp1428Asn
cDNA_position4282
CDS_position4282
Protein_position1428
Exon_number15/18
Codon_changeGat/Aat
Amino_acid_changeD/N
T08A11.1c.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScT08A11.1c.1:c.4276G>A
HGVSpCE54609:p.Asp1426Asn
cDNA_position4276
CDS_position4276
Protein_position1426
Exon_number15/18
Codon_changeGat/Aat
Amino_acid_changeD/N
T08A11.1b.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScT08A11.1b.1:c.4276G>A
HGVSpCE54613:p.Asp1426Asn
cDNA_position4372
CDS_position4276
Protein_position1426
Exon_number16/19
Codon_changeGat/Aat
Amino_acid_changeD/N
T08A11.1a.1 (12)
ReferenceWBPaper00042537
MethodMillion_mutation