WormBase Tree Display for Variation: WBVar00275414

WBVar00275414 Name: Public_name: yj13
  Sequence_details: SeqStatus: Pending_curation
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00047203
      WBStrain00047206
    Laboratory: AT
    Status: Live
  Affects: Gene: WBGene00005156
    Interactor: WBInteraction000052149
      WBInteraction000052150
      WBInteraction000052151
      WBInteraction000052152
      WBInteraction000052153
      WBInteraction000052154
      WBInteraction000052155
      WBInteraction000052156
      WBInteraction000052157
  Genetics: Mapping_data: In_multi_point: 2653
        2657
      In_pos_neg_data: 7204
        7205
        7206
        7209
        7210
  Description: Phenotype: WBPhenotype:0000254 Paper_evidence: WBPaper00028386
        Curator_confirmed: WBPerson712
        Remark: Animals showed reduce attraction to 0.4M, 0.1M and 0.05M chloride. Paper_evidence: WBPaper00028386
            Curator_confirmed: WBPerson712
      WBPhenotype:0000303 Paper_evidence: WBPaper00028386
        Curator_confirmed: WBPerson712
        Remark: Animals showed reduced attraction to 1:10, 1:100 and 1:1000 dilutions of diacetyl. Paper_evidence: WBPaper00028386
            Curator_confirmed: WBPerson712
      WBPhenotype:0000304 Paper_evidence: WBPaper00028386
        Curator_confirmed: WBPerson712
        Remark: Animals showed reduced attraction to 1:10, 1:100 and 1:1000 dilutions of isoamyl alcohol. Paper_evidence: WBPaper00028386
            Curator_confirmed: WBPerson712
      WBPhenotype:0001234 Paper_evidence: WBPaper00028386
        Curator_confirmed: WBPerson712
        Remark: Animals showed reduced repulsion to 1:10, 1:100 and 1:1000 dilutions of 2-nonanone. Paper_evidence: WBPaper00028386
            Curator_confirmed: WBPerson712
      WBPhenotype:0001420 Paper_evidence: WBPaper00029153
        Curator_confirmed: WBPerson712
        Remark: Biofilm is acquired by animals during larval stages L1-L4 but is absent on adult worms. Paper_evidence: WBPaper00029153
            Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00029153
                Curator_confirmed: WBPerson712
      WBPhenotype:0001661 Paper_evidence: WBPaper00056944
        Curator_confirmed: WBPerson712
        Remark: srf-6(yj13) adults exhibited a 2AWC ON phenotype similar to that of nsy-1(ok593) 98% n=108. The complementation heterozygotes showed a 2AWC ON phenotype similar to that of nsy-1(ok593) 82% n=50. Paper_evidence: WBPaper00056944
            Curator_confirmed: WBPerson712
          3% n=3 0 AWC ON Paper_evidence: WBPaper00056944
            Curator_confirmed: WBPerson712
          2% 0 AWC ON, n=3 Paper_evidence: WBPaper00056944
            Curator_confirmed: WBPerson712
        Image: WBPicture0000014904 Paper_evidence: WBPaper00056944
            Curator_confirmed: WBPerson712
        EQ_annotations: Anatomy_term: WBbt:0005672 PATO:0000460 Paper_evidence: WBPaper00056944
                Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: AT28: srf-6(yj13) unc-4(e120) II; kyIs140 [str-2::GFP + lin-15(+)] I Paper_evidence: WBPaper00056944
              Curator_confirmed: WBPerson712
      WBPhenotype:0001677 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: all larval stages (but not adult) label with L1-specific mAbs M37, M38. Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000023 PATO:0000460 Person_evidence: WBPerson261
                Curator_confirmed: WBPerson712
      WBPhenotype:0001687 Paper_evidence: WBPaper00056945
        Curator_confirmed: WBPerson712
        Remark: Animals showed positive staining of L2-L4 stages. mAb M37 stains only the L1 stage in wild type C. elegans under normal growth conditions. Paper_evidence: WBPaper00056945
            Curator_confirmed: WBPerson712
        Image: WBPicture0000014905 Paper_evidence: WBPaper00056945
            Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: MT2605 unc-43(n498) unc-43(n1186) IV and MT1092 unc-43(n498) IV Paper_evidence: WBPaper00056945
              Curator_confirmed: WBPerson712
      WBPhenotype:0001690 Paper_evidence: WBPaper00002589
        Curator_confirmed: WBPerson712
        Remark: Animals bind mAb M37 at stages L1-L4 but not as adults, wildtype worms only bind this anti-body at the L1 stage. Paper_evidence: WBPaper00002589
            Curator_confirmed: WBPerson712
    Phenotype_not_observed: WBPhenotype:0000012 Paper_evidence: WBPaper00002589
        Curator_confirmed: WBPerson712
        Remark: No animal exhibited a ts Daf-c phenotype. Paper_evidence: WBPaper00002589
            Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 27.5 Paper_evidence: WBPaper00002589
              Curator_confirmed: WBPerson712
      WBPhenotype:0000886 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: Gross phenotype WT. Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
  Reference (11)
  Method: Allele