WormBase Tree Display for Variation: WBVar00267087
expand all nodes | collapse all nodes | view schema
WBVar00267087 | Evidence | Paper_evidence | WBPaper00005369 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00267087 | |||
Other_name | uCE1-920 | ||||
CE53740:p.Asn2255SerfsTer18 | |||||
C48B6.6b.1:c.6763_6763+1insGTAT | |||||
CE30258:p.Asn2253SerfsTer18 | |||||
C48B6.6a.1:c.6757_6757+1insGTAT | |||||
HGVSg | CHROMOSOME_I:g.6901880_6901883dup | ||||
Sequence_details | SMap | S_parent | Sequence | C48B6 | |
Flanking_sequences | GGACAACTTCACGCGCTTGAGAATTCTCCTGTTGATCTTGTTTCACAACCCATACATCTGAAAAAAAAAAAGTTTTTAGAAGGCTGGTATGAGCCATATAC | TTTCAAGTCCGGGAGGTGGTTTGAATTCTTGCTGTGAAGTACGGGATGTAATAGTCTCAATCGGGGTGAATGACAGATTGACGAGTGCTCCAAACACACT | |||
Mapping_target | C48B6 | ||||
Type_of_mutation | Insertion | ATAC | |||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
Analysis | SNP_Swan | ||||
Status | Live | ||||
Affects | Gene | WBGene00004879 | |||
Transcript | C48B6.6b.1 | VEP_consequence | frameshift_variant,splice_region_variant | ||
VEP_impact | HIGH | ||||
HGVSc | C48B6.6b.1:c.6763_6763+1insGTAT | ||||
HGVSp | CE53740:p.Asn2255SerfsTer18 | ||||
cDNA_position | 6763-6764 | ||||
CDS_position | 6763-6764 | ||||
Protein_position | 2255 | ||||
Codon_change | aat/aGTATat | ||||
Amino_acid_change | N/SIX | ||||
C48B6.6a.1 | VEP_consequence | frameshift_variant,splice_region_variant | |||
VEP_impact | HIGH | ||||
HGVSc | C48B6.6a.1:c.6757_6757+1insGTAT | ||||
HGVSp | CE30258:p.Asn2253SerfsTer18 | ||||
cDNA_position | 6785-6786 | ||||
CDS_position | 6757-6758 | ||||
Protein_position | 2253 | ||||
Codon_change | aat/aGTATat | ||||
Amino_acid_change | N/SIX | ||||
Reference | WBPaper00005369 | ||||
Method | SNP_Swan |