WormBase Tree Display for Variation: WBVar00251002

WBVar00251002 Name: Public_name: tm2056
    Other_name: F09E10.8.1:c.1415_1552-102del
    HGVSg: CHROMOSOME_X:g.1511526_1512297del
  Sequence_details: SMap: S_parent: Sequence: F09E10
    Flanking_sequences: taaacactacagtagtcctacagaaagggc acgtaacgcccgacgacgccgacgaaaccg
    Mapping_target: F09E10
    Source_location: 7 CHROMOSOME_X 1511525 1512298 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm2056_external
      tm2056_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 2056
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00017298
    Transcript: F09E10.8.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F09E10.8.1:c.1415_1552-102del
        cDNA_position: 1508-?
        CDS_position: 1415-?
        Protein_position: 472-?
        Intron_number: 7/9
        Exon_number: 7/10
    Interactor: WBInteraction000051767
      WBInteraction000051768
      WBInteraction000051769
      WBInteraction000051770
  Isolation: Mutagen: TMP/UV
  Genetics: Map: X
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National Bioresource Project of Japan Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
      WBPhenotype:0002535 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Comment to the National Bioresource Project of Japan from Dr. K. Oegema: wt dyf. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark (2)
  Method: NBP_knockout_allele