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WormBase Tree Display for Variation: WBVar00249258

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Name Class

WBVar00249258EvidencePaper_evidenceWBPaper00005198
NamePublic_namete51
Other_nameZC513.6.1:c.417-1G>A
HGVSgCHROMOSOME_V:g.8030064G>A
Sequence_detailsSMapS_parentSequenceZC513
Flanking_sequencesttgaattaagattacacaacatattttacagatcgaggcacgtcaaaacaataagtaccg
Mapping_targetZC513
Type_of_mutationSubstitutionga
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
Strain (18)
LaboratoryTX
StatusLive
AffectsGeneWBGene00003865
TranscriptZC513.6.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScZC513.6.1:c.417-1G>A
Intron_number4/7
InteractorWBInteraction000504500
WBInteraction000504501
WBInteraction000504502
WBInteraction000524490
WBInteraction000524794
GeneticsInterpolated_map_positionV1.0043
ReferenceWBPaper00010802
WBPaper00012537
WBPaper00018768
Remarka G to A change, this affects the -1 position of the 3' splice site of intron 3 [021016 ck1]
MethodSubstitution_allele