WormBase Tree Display for Variation: WBVar00202259
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WBVar00202259 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00202259 | |||
Other_name | haw69535 | ||||
haw160759 | |||||
cewivar00046397 | |||||
Y50D4C.1a.1:c.904+701A>C | |||||
Y50D4C.1f.1:c.127+701A>C | |||||
Y50D4C.1d.1:c.874+701A>C | |||||
Y50D4C.1e.1:c.481+701A>C | |||||
HGVSg | CHROMOSOME_V:g.991358A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y50D4C | |
Flanking_sequences | ttttaaacaaattttgatgaaaaat | gatgtgatacgtattgctggagcac | |||
Mapping_target | Y50D4C | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (14) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00580624 | |||
Status | Live | ||||
Affects | Gene | WBGene00006770 | |||
Transcript | Y50D4C.1d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1d.1:c.874+701A>C | ||||
Intron_number | 3/5 | ||||
Y50D4C.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1e.1:c.481+701A>C | ||||
Intron_number | 2/4 | ||||
Y50D4C.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1a.1:c.904+701A>C | ||||
Intron_number | 4/7 | ||||
Y50D4C.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1f.1:c.127+701A>C | ||||
Intron_number | 1/3 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw69535 | ||||
Method | WGS_Hawaiian_Waterston |