WormBase Tree Display for Variation: WBVar00202250
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WBVar00202250 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name (3) | |||||
Sequence_details | SMap | S_parent | Sequence | Y50D4C | |
Flanking_sequences | aaaaatatctcgtagtgaaaactacagtaa | ccttcaaaatgactactgtagcaat | |||
Mapping_target | Y50D4C | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00580617 | |||
Status | Live | ||||
Affects | Gene | WBGene00006770 | |||
Transcript | Y50D4C.1d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1d.1:c.356-375T>C | ||||
Intron_number | 1/5 | ||||
Y50D4C.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1a.1:c.386-375T>C | ||||
Intron_number | 2/7 | ||||
Y50D4C.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1b.1:c.344-375T>C | ||||
Intron_number | 1/2 | ||||
Y50D4C.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D4C.1c.1:c.386-375T>C | ||||
Intron_number | 2/3 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw69526 | ||||
Method | WGS_Hawaiian_Waterston |