WormBase Tree Display for Variation: WBVar00178828
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WBVar00178828 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00178828 | |||
Other_name | haw46104 | ||||
haw145341 | |||||
cewivar00110144 | |||||
Y45F3A.3a.1:c.1098+148A>G | |||||
Y45F3A.3b.1:c.1071+148A>G | |||||
HGVSg | CHROMOSOME_III:g.10569799A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y45F3A | |
Flanking_sequences | gagtacagtaatttcagaaagtgca | ttttaattttttatttcaaaaatcg | |||
Mapping_target | Y45F3A | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00565206 | |||
Status | Live | ||||
Affects | Gene | WBGene00012860 | |||
Transcript | Y45F3A.3a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y45F3A.3a.1:c.1098+148A>G | ||||
Intron_number | 7/9 | ||||
Y45F3A.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y45F3A.3b.1:c.1071+148A>G | ||||
Intron_number | 6/8 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw46104 | ||||
Method | WGS_Hawaiian_Waterston |