WormBase Tree Display for Variation: WBVar00144148
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WBVar00144148 | Name | Public_name | e1609 | |||
---|---|---|---|---|---|---|
HGVSg | CHROMOSOME_I:g.6724771_6726066del | |||||
Sequence_details | SMap | S_parent | Sequence | W02D3 | ||
Flanking_sequences | attcacaacagacttgccaaaagaaaatga | ggtcgtgtacttctctatgtaataaatgct | ||||
Mapping_target | W02D3 | |||||
Type_of_mutation | Deletion | |||||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Laboratory | CB | |||||
Status | Live | |||||
Affects | Gene | WBGene00003170 | ||||
Transcript | W02D3.3.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | |||
VEP_impact | HIGH | |||||
cDNA_position | ?-408 | |||||
CDS_position | ?-405 | |||||
Protein_position | ?-135 | |||||
Intron_number | 2-4/8 | |||||
Exon_number | 1-5/9 | |||||
W02D3.3.3 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
cDNA_position | ?-481 | |||||
CDS_position | ?-405 | |||||
Protein_position | ?-135 | |||||
Intron_number | 1-5/9 | |||||
Exon_number | 1-6/10 | |||||
W02D3.3.2 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
cDNA_position | ?-488 | |||||
CDS_position | ?-405 | |||||
Protein_position | ?-135 | |||||
Intron_number | 1-5/9 | |||||
Exon_number | 1-6/10 | |||||
Genetics | Interpolated_map_position | I | 1.29914 | |||
Description | Phenotype | WBPhenotype:0000456 | Paper_evidence | WBPaper00000502 | ||
Curator_confirmed | WBPerson712 | |||||
Recessive | Paper_evidence | WBPaper00000502 | ||||
Curator_confirmed | WBPerson712 | |||||
Reference | WBPaper00000502 | |||||
WBPaper00011211 | ||||||
WBPaper00022916 | ||||||
Method | Deletion_allele |