WormBase Tree Display for Variation: WBVar00143923
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WBVar00143923 | Evidence | Paper_evidence | WBPaper00000779 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e1328 | |||||
Other_name | CE09349:p.Gln1860Ter | ||||||
F11C3.3.1:c.5578C>T | |||||||
HGVSg | CHROMOSOME_I:g.14856547G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F32A7 | |||
Flanking_sequences | ggacgcgccgatagacgtgttcgtgagctt | aattccaggttgatgaggacaagaagaact | |||||
Mapping_target | F32A7 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00000779 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006789 | |||||
Transcript | F11C3.3.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | F11C3.3.1:c.5578C>T | ||||||
HGVSp | CE09349:p.Gln1860Ter | ||||||
cDNA_position | 5610 | ||||||
CDS_position | 5578 | ||||||
Protein_position | 1860 | ||||||
Exon_number | 9/11 | ||||||
Codon_change | Caa/Taa | ||||||
Amino_acid_change | Q/* | ||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00000779 | |||
Genetics | Interpolated_map_position | I | 27.9599 | ||||
Reference | WBPaper00014396 | ||||||
Method | Substitution_allele |