WormBase Tree Display for Variation: WBVar00143854
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WBVar00143854 | Name | Public_name | e1240 | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence_details | SeqStatus | Pending_curation | |||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Strain | WBStrain00004394 | ||||||||
WBStrain00004437 | |||||||||
WBStrain00006448 | |||||||||
Laboratory | CB | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00003100 | |||||||
Interactor (14) | |||||||||
Genetics | Mapping_data | In_2_point | 337 | ||||||
In_multi_point | 206 | ||||||||
1059 | |||||||||
In_pos_neg_data (15) | |||||||||
Description | Phenotype | WBPhenotype:0000070 | Paper_evidence | WBPaper00031953 | |||||
Person_evidence | WBPerson261 | ||||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | adult male tail morphology grossly abnormal, often with hermaphrodite tail spike | Person_evidence | WBPerson261 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
EQ_annotations | Life_stage | WBls:0000056 | PATO:0000460 | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000445 | Person_evidence | WBPerson261 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | adult male synthesizes yolk proteins | Person_evidence | WBPerson261 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
EQ_annotations | Life_stage | WBls:0000056 | PATO:0000460 | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000827 | Person_evidence | WBPerson261 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | V lineages abnormal, other defects | Person_evidence | WBPerson261 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
EQ_annotations | Life_stage | WBls:0000056 | PATO:0000460 | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||||
Ease_of_scoring | ES3_Easy_to_score | Person_evidence | WBPerson261 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000889 | Paper_evidence | WBPaper00031953 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | EFF-1::GFP levels were often reduced in the tail tips of mid-L4 males. | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0004381 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||
Curator_confirmed | WBPerson712 | ||||||||
WBbt:0004380 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
WBbt:0004378 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
WBbt:0004377 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Life_stage | WBls:0000073 | PATO:0000460 | Paper_evidence | WBPaper00031953 | |||||
Curator_confirmed | WBPerson712 | ||||||||
Phenotype_assay | Genotype | fsEx135[EFF-1::GFP::outron::mCherry] | Paper_evidence | WBPaper00031953 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0001431 | Paper_evidence | WBPaper00031953 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | 8% animals displayed short Lep tails (n=26). | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Penetrance | Low | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Phenotype_not_observed | WBPhenotype:0000306 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | dmd-3::YFP expression was expressed at wild-type levels in the tail tip. | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Penetrance | Incomplete | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0004381 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||
Curator_confirmed | WBPerson712 | ||||||||
WBbt:0004380 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
WBbt:0004378 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
WBbt:0004377 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Life_stage | WBls:0000073 | PATO:0000460 | Paper_evidence | WBPaper00031953 | |||||
Curator_confirmed | WBPerson712 | ||||||||
Phenotype_assay | Genotype | fsEx154[DMD-3::YFP,cc::GFP] | Paper_evidence | WBPaper00031953 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0000702 | Paper_evidence | WBPaper00031953 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | Cell fusion occurred normally in 100% of the animals (n=40), as assayed by the loss of cell boundaries (visualized by AJM::GFP). | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0004381 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||
Curator_confirmed | WBPerson712 | ||||||||
WBbt:0004380 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
WBbt:0004378 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
WBbt:0004377 | PATO:0000460 | Paper_evidence | WBPaper00031953 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Life_stage | WBls:0000073 | PATO:0000460 | Paper_evidence | WBPaper00031953 | |||||
Curator_confirmed | WBPerson712 | ||||||||
Phenotype_assay | Genotype | syIs78[AJM-1::GFP, unc-119(+)] | Paper_evidence | WBPaper00031953 | |||||
Curator_confirmed | WBPerson712 | ||||||||
WBPhenotype:0001025 | Person_evidence | WBPerson261 | |||||||
Curator_confirmed | WBPerson712 | ||||||||
Remark | Hermaphrodite WT | Person_evidence | WBPerson261 | ||||||
Curator_confirmed | WBPerson712 | ||||||||
Reference | WBPaper00016427 | ||||||||
WBPaper00013709 | |||||||||
WBPaper00016477 | |||||||||
WBPaper00031953 | |||||||||
WBPaper00015487 | |||||||||
WBPaper00010536 | |||||||||
WBPaper00016592 | |||||||||
WBPaper00012447 | |||||||||
WBPaper00018400 | |||||||||
Method | Allele |