WormBase Tree Display for Variation: WBVar00143762
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WBVar00143762 | Evidence | Paper_evidence | WBPaper00045066 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e1122 | |||||
Other_name | CE32078:p.Gln482Ter | ||||||
CE22238:p.Gln482Ter | |||||||
Y49E10.23a.1:c.1444C>T | |||||||
Y49E10.23b.1:c.1444C>T | |||||||
HGVSg | CHROMOSOME_III:g.12479881C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | Y49E10 | |||
Flanking_sequences | aagcacaaatctctttatttttcagtggaa | aaacagaagctaagcttgcagaagagaaga | |||||
Mapping_target | Y49E10 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00045066 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004247 | ||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00013042 | |||||
Transcript | Y49E10.23b.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | Y49E10.23b.1:c.1444C>T | ||||||
HGVSp | CE32078:p.Gln482Ter | ||||||
cDNA_position | 1511 | ||||||
CDS_position | 1444 | ||||||
Protein_position | 482 | ||||||
Exon_number | 10/16 | ||||||
Codon_change | Caa/Taa | ||||||
Amino_acid_change | Q/* | ||||||
Y49E10.23a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | Y49E10.23a.1:c.1444C>T | ||||||
HGVSp | CE22238:p.Gln482Ter | ||||||
cDNA_position | 1505 | ||||||
CDS_position | 1444 | ||||||
Protein_position | 482 | ||||||
Exon_number | 10/15 | ||||||
Codon_change | Caa/Taa | ||||||
Amino_acid_change | Q/* | ||||||
Genetics | Interpolated_map_position | III | 17.952 | ||||
Mapping_data | In_2_point | 90 | |||||
In_multi_point | 89 | ||||||
Description | Phenotype | WBPhenotype:0000643 | Person_evidence | WBPerson261 | |||
Curator_confirmed | WBPerson712 | ||||||
Remark | slightly irregular movement. | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Ease_of_scoring | ES1_Very_hard_to_score | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00045066 | ||||||
Method | Substitution_allele |