WormBase Tree Display for Variation: WBVar00143064
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WBVar00143064 | Evidence | Paper_evidence | WBPaper00041308 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e252 | |||||
Other_name | CE45298:p.Trp984Ter | ||||||
CE45373:p.Trp1075Ter | |||||||
CE45344:p.Trp1357Ter | |||||||
C27H6.1c.1:c.2952G>A | |||||||
C27H6.1b.1:c.3225G>A | |||||||
C27H6.1a.1:c.4071G>A | |||||||
HGVSg | CHROMOSOME_V:g.9968288C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | C27H6 | |||
Flanking_sequences | agatattctgccaatgtatacggaaagatg | attcgatttgaagctttggagtttcattca | |||||
Mapping_target | C27H6 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00041308 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006777 | |||||
Transcript | C27H6.1b.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | C27H6.1b.1:c.3225G>A | ||||||
HGVSp | CE45373:p.Trp1075Ter | ||||||
cDNA_position | 3225 | ||||||
CDS_position | 3225 | ||||||
Protein_position | 1075 | ||||||
Exon_number | 7/11 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
C27H6.1a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C27H6.1a.1:c.4071G>A | ||||||
HGVSp | CE45344:p.Trp1357Ter | ||||||
cDNA_position | 4083 | ||||||
CDS_position | 4071 | ||||||
Protein_position | 1357 | ||||||
Exon_number | 10/14 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
C27H6.1c.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | C27H6.1c.1:c.2952G>A | ||||||
HGVSp | CE45298:p.Trp984Ter | ||||||
cDNA_position | 2952 | ||||||
CDS_position | 2952 | ||||||
Protein_position | 984 | ||||||
Exon_number | 5/8 | ||||||
Codon_change | tgG/tgA | ||||||
Amino_acid_change | W/* | ||||||
Genetics | Interpolated_map_position | V | 2.22241 | ||||
Mapping_data | In_multi_point | 147 | |||||
Method | Substitution_allele |