WormBase Tree Display for Variation: WBVar00140316
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WBVar00140316 | Name | Public_name | WBVar00140316 | ||
---|---|---|---|---|---|
Other_name | cbh44842 | ||||
HGVSg | chrV:g.2273267T>C | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.NA_193 | |
Flanking_sequences | ccatagtcaccatagtcggtgtagg | catatcttgatgatgataaacgtca | |||
Mapping_target | cb25.NA_193 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis briggsae | |||
Strain | WBStrain00041078 | ||||
Laboratory | CP | ||||
Person | WBPerson3706 | ||||
WBPerson227 | |||||
WBPerson225 | |||||
Status | Live | ||||
Affects | Gene | WBGene00042654 | |||
Transcript | CBG24578a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578a.1:c.1121-495A>G | ||||
Intron_number | 7/11 | ||||
CBG24578b.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | CBG24578b.1:c.1132A>G | ||||
HGVSp | CBP40114.1:p.Thr378Ala | ||||
cDNA_position | 1141 | ||||
CDS_position | 1132 | ||||
Protein_position | 378 | ||||
Exon_number | 8/11 | ||||
Codon_change | Acc/Gcc | ||||
Amino_acid_change | T/A | ||||
CBG24578c.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | CBG24578c.1:c.1255A>G | ||||
HGVSp | CBP43939.1:p.Thr419Ala | ||||
cDNA_position | 1255 | ||||
CDS_position | 1255 | ||||
Protein_position | 419 | ||||
Exon_number | 7/10 | ||||
Codon_change | Acc/Gcc | ||||
Amino_acid_change | T/A | ||||
CBG24578d.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | ||||
HGVSc | CBG24578d.1:c.991A>G | ||||
HGVSp | CBP41903.1:p.Thr331Ala | ||||
cDNA_position | 991 | ||||
CDS_position | 991 | ||||
Protein_position | 331 | ||||
Exon_number | 7/10 | ||||
Codon_change | Acc/Gcc | ||||
Amino_acid_change | T/A | ||||
CBG24578e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578e.1:c.986-495A>G | ||||
Intron_number | 7/11 | ||||
CBG24578f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578f.1:c.986-495A>G | ||||
Intron_number | 7/10 | ||||
CBG24578g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | CBG24578g.1:c.1121-495A>G | ||||
Intron_number | 7/10 | ||||
Method | SNP |