WormBase Tree Display for Variation: WBVar00108978

WBVar00108978 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00108978
    Other_name: cbs44499
      cb44499 Paper_evidence: WBPaper00055507
    HGVSg: chrI:g.4412422A>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0071c2
    Flanking_sequences: tttcggaccagatctcaagtttagt tctgttgtgctgcaggtttatggtg
    Mapping_target: cb25.fpc0071c2
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: RGCY CviJI, CviTI 430 131 114 100 86 66 54 14 5
        CAC HindI 145 140 133 126 91 80 66 43 37 31 28 18 16 16 15 13 2
      Polymorphic_strain_digest: RGCY CviJI, CviTI 544 131 100 86 66 54 14 5
        CAC HindI 140 133 126 92 91 80 66 53 43 37 31 28 18 16 16 15 13 2
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00026800
    Transcript: CBG04054.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG04054.1:c.125A>G
        HGVSp: CBP46047.1:p.Lys42Arg
        cDNA_position: 142
        CDS_position: 125
        Protein_position: 42
        Exon_number: 3/8
        Codon_change: aAa/aGa
        Amino_acid_change: K/R
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP