WormBase Tree Display for Variation: WBVar00108977

WBVar00108977 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00108977
    Other_name: cbs44498
      cb44498 Paper_evidence: WBPaper00055507
    HGVSg: chrI:g.4412492C>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0071c2
    Flanking_sequences: tatttctacccaacggaccaacaaa ccatcgttattggtatctagtgcct
    Mapping_target: cb25.fpc0071c2
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: RGCY CviJI, CviTI 500 114 100 86 66 61 54 14 5
        CAC HindI 175 140 133 126 91 80 66 40 37 28 19 18 16 16 13 2
      Polymorphic_strain_digest: RGCY CviJI, CviTI 614 100 86 66 61 54 14 5
        CAC HindI 140 133 126 92 91 83 80 66 40 37 28 19 18 16 16 13 2
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00026800
    Transcript: CBG04054.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG04054.1:c.195C>T
        HGVSp: CBP46047.1:p.Gly65%3D
        cDNA_position: 212
        CDS_position: 195
        Protein_position: 65
        Exon_number: 3/8
        Codon_change: ggC/ggT
        Amino_acid_change: G
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP