WormBase Tree Display for Variation: WBVar00108954

WBVar00108954 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00108954
    Other_name: cbs44475
    HGVSg: chrI:g.4472413T>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0071c2
    Flanking_sequences: gaaataaaaacttttttcttaaaacgaaaaaaaaacgaatttttagcaca caactgcttcaaaaggttctcaactactagagttgaaaatcaacaatttt
    Mapping_target: cb25.fpc0071c2
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CAGNNNCTG AlwNI, CaiI 1000
        CTAG BfaI, MaeI, XspI 313 285 214 188
      Polymorphic_strain_digest: CAGNNNCTG AlwNI, CaiI 503 497
        CTAG BfaI, MaeI, XspI 402 313 285
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00026781
    Transcript: CBG04034.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG04034.1:c.3+1972A>G
        Intron_number: 2/8
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP