WormBase Tree Display for Variation: WBVar00094622
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| WBVar00094622 | Evidence | Paper_evidence | WBPaper00004137 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | om97 | |||||
| Other_name | CE27140:p.Gln171Ter | ||||||
| F26A3.3.1:c.511C>T | |||||||
| HGVSg | CHROMOSOME_I:g.7655675G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | F26A3 | |||
| Flanking_sequences | ccaacacaagccgataaaattggaatgaac | aaatcaaagtggagttcgaattcgataaaa | |||||
| Mapping_target | F26A3 | ||||||
| Type_of_mutation | Substitution | c | t | ||||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00040471 | ||||||
| Laboratory | EL | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00001214 | |||||
| Transcript | F26A3.3.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F26A3.3.1:c.511C>T | ||||||
| HGVSp | CE27140:p.Gln171Ter | ||||||
| cDNA_position | 577 | ||||||
| CDS_position | 511 | ||||||
| Protein_position | 171 | ||||||
| Exon_number | 4/17 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | I | 2.21479 | ||||
| Description | Phenotype (11) | ||||||
| Phenotype_not_observed | WBPhenotype:0001759 | Paper_evidence | WBPaper00031961 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| Remark | 21U-RNAs were expressed normally, as determined by Northern blot analysis. | Paper_evidence | WBPaper00031961 | ||||
| Curator_confirmed | WBPerson712 | ||||||
| Reference | WBPaper00031961 | ||||||
| WBPaper00004137 | |||||||
| WBPaper00023654 | |||||||
| Method | Substitution_allele |
