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WormBase Tree Display for Variation: WBVar00092675

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Name Class

WBVar00092675NamePublic_nameok1461
Other_nameB0272.1.1:c.166+81_946delinsAC
HGVSgCHROMOSOME_X:g.9435145_9436599delinsGT
Sequence_detailsSMapS_parentSequenceB0272
Flanking_sequencescttctttcatgctcattcttccgcggaacaagtagtatttttgaagagtcaatagtgaaa
Mapping_targetB0272
Type_of_mutationInsertionGT
Deletion
PCR_productok1461_external
ok1461_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00036287
WBStrain00056608
WBStrain00056609
LaboratoryRB
CZ
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00006538
TranscriptB0272.1.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScB0272.1.1:c.166+81_946delinsAC
cDNA_position?-948
CDS_position?-946
Protein_position?-316
Intron_number3-6/8
Exon_number4-7/9
InteractorWBInteraction000504815
WBInteraction000504816
IsolationMutagenEMS
GeneticsMapping_dataIn_multi_point5208
Description (2)
ReferenceWBPaper00036195
WBPaper00065994
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele