WormBase Tree Display for Variation: WBVar00091674
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WBVar00091674 | Name | Public_name | ok377 | ||||
---|---|---|---|---|---|---|---|
Other_name | F59D12.4.1:c.482_643-201del | ||||||
HGVSg | CHROMOSOME_X:g.15683341_15684534del | ||||||
Sequence_details | SMap | S_parent | Sequence | C03H12 | |||
Flanking_sequences | aaaaacaaatatttcagtattcaatcacaa | attggtggaggactgagtcaagcttgcaaa | |||||
Mapping_target | C03H12 | ||||||
Type_of_mutation | Deletion | ||||||
PCR_product | OK377_external | ||||||
OK377_internal | |||||||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00035602 | ||||||
Laboratory | RB | ||||||
Person | WBPerson46 | ||||||
KO_consortium_allele | |||||||
Status | Live | ||||||
Affects | Gene | WBGene00001687 | |||||
Transcript | F59D12.4.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,intron_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | F59D12.4.1:c.482_643-201del | ||||||
cDNA_position | 607-? | ||||||
CDS_position | 482-? | ||||||
Protein_position | 161-? | ||||||
Intron_number | 4/10 | ||||||
Exon_number | 4/11 | ||||||
Interactor | WBInteraction000521942 | ||||||
Isolation | Mutagen | UV/TMP | |||||
Genetics | Mapping_data | In_multi_point | 4383 | ||||
Description | Phenotype_not_observed | WBPhenotype:0000022 | Paper_evidence | WBPaper00029002 | |||
Curator_confirmed | WBPerson557 | ||||||
WBPhenotype:0001652 | Paper_evidence | WBPaper00032446 | |||||
Curator_confirmed | WBPerson2021 | ||||||
WBPhenotype:0001767 | Paper_evidence | WBPaper00032413 | |||||
Curator_confirmed | WBPerson2021 | ||||||
Remark | No significant defects in embryonic DA/DB motor neuron left/right projection patterns (Figure S1A). | Paper_evidence | WBPaper00032413 | ||||
Curator_confirmed | WBPerson2021 | ||||||
Variation_effect | Null | Paper_evidence | WBPaper00032413 | ||||
Curator_confirmed | WBPerson2021 | ||||||
Reference | WBPaper00032446 | ||||||
WBPaper00032413 | |||||||
WBPaper00029002 | |||||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||||
Method | KO_consortium_allele |