WormBase Tree Display for Variation: WBVar00091027

WBVar00091027 Evidence: Paper_evidence: WBPaper00029073
  Name: Public_name: WBVar00091027
    Other_name: niDf6(X)
      CE31186:p.Met1_?379
      F56B6.5a.1:c.1_1139del
      F56B6.5a.2:c.1_1139del
      F56B6.5c.1:c.31_1151del
      CE52701:p.Met11LysfsTer12
      F56B6.5b.1:c.1_1121del
      CE39375:p.Met1_?373
      F56B6.5d.1:c.31_1169del
      CE52707:p.Met11LysfsTer12
    HGVSg: CHROMOSOME_X:g.3528818_3531167del
  Sequence_details: SMap: S_parent: Sequence: F56B6
    Flanking_sequences: AAAAGAAAAGTTAAATTTTTTCAGCATGCG GTACTTGAAAATTAATTAGTTTAGTTGATT
    Mapping_target: F56B6
    CGH_deleted_probes: ATGAGCGATTCCTCGCAACACCTACGGCTTGCGCTGACGGTCACACATCT CCAGAAGAAGAAAGTCCAGTGGACTCTACTGAAAACTTGGAAATGGAGAG
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033541
    Laboratory: VC
    Person: WBPerson427
    Detection_method: Oligo Array CGH
    Status: Live
  Affects: Gene: WBGene00006864
    Transcript: F56B6.5d.1 (11)
      F56B6.5c.1 (11)
      F56B6.5a.2 (11)
      F56B6.5b.1 (11)
      F56B6.5a.1 (11)
  Reference: WBPaper00029073
  Remark: Flanking sequences represent the nearest array oligo sequences present in the deletion chromosome on the basis of fluorescence ratio. These should not be considered hard breakpoints in the absence of actual sequence data. Original data available on-line at http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6294.
  Method: CGH_allele