WormBase Tree Display for Variation: WBVar00089160
expand all nodes | collapse all nodes | view schema
WBVar00089160 | Name | Public_name | mn416 | ||||
---|---|---|---|---|---|---|---|
Other_name | Y49F6B.4.1:c.18-1G>A | ||||||
HGVSg | CHROMOSOME_II:g.3482582G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y49F6B | |||
Flanking_sequences | atagctattttccataacccaaaccttcca | aaacctgcgaaacgccgattttcgaaagct | |||||
Mapping_target | Y49F6B | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00023890 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00034394 | ||||||
WBStrain00034411 | |||||||
WBStrain00034413 | |||||||
WBStrain00034415 | |||||||
Laboratory | SP | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00004896 | |||||
Transcript | Y49F6B.4.1 | VEP_consequence | splice_acceptor_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | Y49F6B.4.1:c.18-1G>A | ||||||
Intron_number | 2/8 | ||||||
Interactor | WBInteraction000501527 | ||||||
WBInteraction000501528 | |||||||
WBInteraction000519064 | |||||||
WBInteraction000519076 | |||||||
WBInteraction000519077 | |||||||
WBInteraction000519078 | |||||||
WBInteraction000519079 | |||||||
WBInteraction000519080 | |||||||
WBInteraction000519081 | |||||||
Genetics | Interpolated_map_position | II | -6.26161 | ||||
Mapping_data | In_multi_point | 2771 | |||||
2772 | |||||||
2773 | |||||||
2774 | |||||||
Description | Phenotype_not_observed | WBPhenotype:0000886 | Person_evidence | WBPerson261 | |||
Curator_confirmed | WBPerson712 | ||||||
Remark | Essentially WT alone. | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00014786 | ||||||
WBPaper00014522 | |||||||
WBPaper00015748 | |||||||
Method | Substitution_allele |