WormBase Tree Display for Variation: WBVar00088580
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WBVar00088580 | Evidence | Paper_evidence | WBPaper00040140 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | m118 | ||||||
Other_name | F36A4.7.1:c.2332-44G>A | |||||||
HGVSg | CHROMOSOME_IV:g.4252026G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F36A4 | ||||
Flanking_sequences | attttaaattagttaaaactcttcaaattt | actggatttttgatgggattttcaaaaatt | ||||||
Mapping_target | F36A4 | |||||||
Type_of_mutation | Substitution | g | a | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (39) | ||||||||
Laboratory | DR | |||||||
Status | Live | |||||||
Linked_to (14) | ||||||||
Affects | Gene | WBGene00000123 | ||||||
Transcript | F36A4.7.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F36A4.7.1:c.2332-44G>A | |||||||
Intron_number | 7/13 | |||||||
Interactor (5) | ||||||||
Genetics | Interpolated_map_position | IV | 0.00866967 | |||||
Mapping_data | In_multi_point | 898 | ||||||
Description | Phenotype | WBPhenotype:0000089 | Paper_evidence | WBPaper00000654 | ||||
WBPaper00040140 | ||||||||
WBPaper00001073 | ||||||||
Person_evidence | WBPerson14421 | |||||||
WBPerson261 | ||||||||
Curator_confirmed | WBPerson712 | |||||||
WBPerson528 | ||||||||
Remark | heterozygote m118/+ resistant to 400ug/ml alpha-amanitin | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | |||||||
Animals are able to grow and reproduce in the presence of alpha-amanitin. | Paper_evidence | WBPaper00000654 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Penetrance | Complete | Person_evidence | WBPerson14421 | |||||
Curator_confirmed | WBPerson712 | |||||||
Semi_dominant | Person_evidence | WBPerson261 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Dominant | Paper_evidence | WBPaper00000654 | ||||||
Person_evidence | WBPerson14421 | |||||||
Curator_confirmed | WBPerson712 | |||||||
Affected_by | Molecule | WBMol:00004324 | Paper_evidence | WBPaper00000654 | ||||
Person_evidence | WBPerson261 | |||||||
Curator_confirmed | WBPerson712 | |||||||
Ease_of_scoring | ES1_Very_hard_to_score | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_not_observed | WBPhenotype:0000059 | Paper_evidence | WBPaper00001073 | |||||
Curator_confirmed | WBPerson528 | |||||||
WBPhenotype:0000520 | Person_evidence | WBPerson261 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | no other phenotype | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | |||||||
Semi_dominant | Person_evidence | WBPerson261 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Reference (15) | ||||||||
Method | Substitution_allele |