WormBase Tree Display for Variation: WBVar00080791
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WBVar00080791 | Name | Public_name | WBVar00080791 | ||
---|---|---|---|---|---|
Other_name | haw105151 | ||||
cewivar00058657 | |||||
C54D2.5a.2:c.-76-1208G>A | |||||
C54D2.5a.1:c.-76-1208G>A | |||||
HGVSg | CHROMOSOME_X:g.7862515C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C54D2 | |
Flanking_sequences | tgaaatttaaaaattaaatttaaat | tcgaaacaaaattaagttttaatct | |||
Mapping_target | C54D2 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (34) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000367 | |||
Transcript | C54D2.5a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C54D2.5a.1:c.-76-1208G>A | ||||
Intron_number | 1/31 | ||||
C54D2.5a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54D2.5a.2:c.-76-1208G>A | ||||
Intron_number | 2/32 | ||||
Remark | [20081124 db] this Variation was previously named hw105151 | ||||
Method | WGS_Hawaiian_Waterston |