WormBase Tree Display for Variation: WBVar00080783
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WBVar00080783 | Name | Public_name | WBVar00080783 | ||
---|---|---|---|---|---|
Other_name | haw105143 | ||||
cewivar00058647 | |||||
C54D2.5a.1:c.151-613C>T | |||||
C54D2.5c.1:c.151-613C>T | |||||
C54D2.5a.3:c.151-613C>T | |||||
C54D2.5g.1:c.151-613C>T | |||||
C54D2.5e.1:c.151-613C>T | |||||
C54D2.5d.1:c.151-613C>T | |||||
C54D2.5a.2:c.151-613C>T | |||||
HGVSg | CHROMOSOME_X:g.7858939G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C54D2 | |
Flanking_sequences | actcccattagaactggacttcatt | atccacttcgatagcttatggctga | |||
Mapping_target | C54D2 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (33) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00000367 | |||
Transcript | C54D2.5a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C54D2.5a.1:c.151-613C>T | ||||
Intron_number | 4/31 | ||||
C54D2.5g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54D2.5g.1:c.151-613C>T | ||||
Intron_number | 2/28 | ||||
C54D2.5a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54D2.5a.2:c.151-613C>T | ||||
Intron_number | 5/32 | ||||
C54D2.5c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54D2.5c.1:c.151-613C>T | ||||
Intron_number | 3/30 | ||||
C54D2.5a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54D2.5a.3:c.151-613C>T | ||||
Intron_number | 3/30 | ||||
C54D2.5d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54D2.5d.1:c.151-613C>T | ||||
Intron_number | 3/31 | ||||
C54D2.5e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C54D2.5e.1:c.151-613C>T | ||||
Intron_number | 3/30 | ||||
Remark | [20081124 db] this Variation was previously named hw105143 | ||||
Method | WGS_Hawaiian_Waterston |