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WormBase Tree Display for Variation: WBVar00080783

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Name Class

WBVar00080783NamePublic_nameWBVar00080783
Other_namehaw105143
cewivar00058647
C54D2.5a.1:c.151-613C>T
C54D2.5c.1:c.151-613C>T
C54D2.5a.3:c.151-613C>T
C54D2.5g.1:c.151-613C>T
C54D2.5e.1:c.151-613C>T
C54D2.5d.1:c.151-613C>T
C54D2.5a.2:c.151-613C>T
HGVSgCHROMOSOME_X:g.7858939G>A
Sequence_detailsSMapS_parentSequenceC54D2
Flanking_sequencesactcccattagaactggacttcattatccacttcgatagcttatggctga
Mapping_targetC54D2
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (33)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.151-613C>T
Intron_number4/31
C54D2.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5g.1:c.151-613C>T
Intron_number2/28
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.151-613C>T
Intron_number5/32
C54D2.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5c.1:c.151-613C>T
Intron_number3/30
C54D2.5a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.3:c.151-613C>T
Intron_number3/30
C54D2.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5d.1:c.151-613C>T
Intron_number3/31
C54D2.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5e.1:c.151-613C>T
Intron_number3/30
Remark[20081124 db] this Variation was previously named hw105143
MethodWGS_Hawaiian_Waterston