WormBase Tree Display for Variation: WBVar00077139
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WBVar00077139 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00077139 | |||
Other_name (6) | |||||
HGVSg | CHROMOSOME_X:g.3527085C>G | ||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | |
Flanking_sequences | caagcctttcgcatgtttcttctgt | aaacttgacactcattttgccgctc | |||
Mapping_target | F56B6 | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00245155 | |||
Status | Live | ||||
Affects | Gene | WBGene00006864 | |||
Transcript | F56B6.5d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.5d.1:c.25-1727C>G | ||||
Intron_number | 1/10 | ||||
F56B6.5c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.5c.1:c.25-1727C>G | ||||
Intron_number | 1/10 | ||||
F56B6.5a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56B6.5a.2:c.-6-1727C>G | ||||
Intron_number | 1/12 | ||||
Reference | WBPaper00004703 | ||||
Remark | [20081124 db] this Variation was previously named hw101499 | ||||
Method | WGS_Hawaiian_Waterston |