WormBase Tree Display for Variation: WBVar00076638
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WBVar00076638 | Name | Public_name | WBVar00076638 | ||
---|---|---|---|---|---|
Other_name | haw100998 | ||||
cewivar00271186 | |||||
CE50147:p.Gly201= | |||||
Y41G9A.4a.1:c.603G>A | |||||
CE50237:p.Gly201= | |||||
CE50293:p.Gly201= | |||||
Y41G9A.4c.1:c.603G>A | |||||
Y41G9A.4b.1:c.603G>A | |||||
CE50190:p.Gly201= | |||||
Y41G9A.4d.1:c.603G>A | |||||
HGVSg | CHROMOSOME_X:g.2959228G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y41G9A | |
Flanking_sequences | aagtagatcggcaaagtttttacgg | gacccaactgatgcgatgaagactc | |||
Mapping_target | Y41G9A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021528 | |||
Transcript | Y41G9A.4c.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y41G9A.4c.1:c.603G>A | ||||
HGVSp | CE50293:p.Gly201= | ||||
cDNA_position | 621 | ||||
CDS_position | 603 | ||||
Protein_position | 201 | ||||
Exon_number | 6/21 | ||||
Codon_change | ggG/ggA | ||||
Amino_acid_change | G | ||||
Y41G9A.4a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y41G9A.4a.1:c.603G>A | ||||
HGVSp | CE50190:p.Gly201= | ||||
cDNA_position | 603 | ||||
CDS_position | 603 | ||||
Protein_position | 201 | ||||
Exon_number | 5/12 | ||||
Codon_change | ggG/ggA | ||||
Amino_acid_change | G | ||||
Y41G9A.4d.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y41G9A.4d.1:c.603G>A | ||||
HGVSp | CE50237:p.Gly201= | ||||
cDNA_position | 603 | ||||
CDS_position | 603 | ||||
Protein_position | 201 | ||||
Exon_number | 5/20 | ||||
Codon_change | ggG/ggA | ||||
Amino_acid_change | G | ||||
Y41G9A.4b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y41G9A.4b.1:c.603G>A | ||||
HGVSp | CE50147:p.Gly201= | ||||
cDNA_position | 620 | ||||
CDS_position | 603 | ||||
Protein_position | 201 | ||||
Exon_number | 6/22 | ||||
Codon_change | ggG/ggA | ||||
Amino_acid_change | G | ||||
Remark | [20081124 db] this Variation was previously named hw100998 | ||||
Method | WGS_Hawaiian_Waterston |