WormBase Tree Display for Variation: WBVar00051156

WBVar00051156 Name: Public_name: WBVar00051156
    Other_name: pas21828
      haw105179
      cewivar00058692
      C54D2.5a.2:c.-77+2735C>T
      C54D2.5a.1:c.-77+2827C>T
    HGVSg: CHROMOSOME_X:g.7873076G>A
  Sequence_details: SMap: S_parent: Sequence: EGAP3
    Flanking_sequences: TTTTTTAATCAAAAATATCAACTGTCAAAGGACAATCAAAGTAAAGTTTG CTTTGGTTTTGTGGTTGACTTTATTGCTAAGTGTAAAATTAACACTGGAG
    Mapping_target: EGAP3
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (34)
    Laboratory: RW
    Person: WBPerson6900
      WBPerson1562
    Analysis: WGS_Pasadena_Quinlan
      Million_mutation_project_reanalysis
      WGS_Hawaiian_Waterston
    History: Acquires_merge: WBVar00080819
    Status: Live
  Affects: Gene: WBGene00000367
    Transcript: C54D2.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C54D2.5a.1:c.-77+2827C>T
        Intron_number: 1/31
      C54D2.5a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C54D2.5a.2:c.-77+2735C>T
        Intron_number: 2/32
  Method: WGS_Pasadena_Quinlan