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WormBase Tree Display for Variation: WBVar00051151

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Name Class

WBVar00051151NamePublic_nameWBVar00051151
Other_namepas21827
haw105177
cewivar00058691
C54D2.5a.2:c.-77+2798T>G
C54D2.5a.1:c.-77+2890T>G
HGVSgCHROMOSOME_X:g.7873013A>C
Sequence_detailsSMapS_parentSequenceEGAP3
Flanking_sequencesAATTAAAAAAAAACCATTTTAAAAAGTTATTTTAAATGCCCACTGCTAGATGTCAGAATTGTTTTTTTAATCAAAAATATCAACTGTCAAAGGACAATCA
Mapping_targetEGAP3
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (34)
LaboratoryRW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00080817
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.-77+2890T>G
Intron_number1/31
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.-77+2798T>G
Intron_number2/32
MethodWGS_Pasadena_Quinlan